Webinar: The use of preclinical human tissue pharmacology assays coupled with ‘omics analysis to better inform precision medicine strategies prior to clinical trials

 The webinar in brief

The webinar describes a study where:

  • Diseased tissue ethically acquired from patients suffering from chronic obstructive pulmonary disease (COPD) was used to investigate inter-patient variability in drug efficacy using ex vivo organocultures of fresh lung tissue as the test system.
  • The reduction in inflammatory cytokines in the presence of various test drugs was used as the measure of drug efficacy, followed by integration with genotyping information from targeted sequencing data.
  • Bioinformatics analysis showed that variants in the CYP2E1 and SMAD3 genes are associated with patient response and may be linked to the observed differences in drug response.

This webinar features data published on the scientific paper available here

Max - technical director

Speaker’s biography

Max Bylesjö has been with Fios Genomics since September 2012 and joined the Board of Directors in January 2017. A bioinformatician by training, Max is responsible for the operations group including project delivery. In addition, he oversees the R&D of new analysis methods and the IT infrastructure of the company. Max has a PhD in Chemistry and MSc in Engineering Biology, both from Umeå University, Sweden, and has previous commercial experience from senior positions with Sistemic Scotland and Almac Diagnostics.

Request a bioinformatics sample report

The report has been created to showcase our data analysis reports and capabilities in DNAseq.

In the project included in the sample report, Fios Genomics have analysed paired end Illumina sequencing of DNA from 161 isolates of Mycobacterium tuberculosis. The isolates were obtained from 12 provinces across China, and were selected on the basis of their drug resistance profiles. 44 were drug sensitive. 94 were multidrug resistant (MDR), defined as resistant to the frontline antibiotics rifampicin and isoniazid. 23 were extensively drug resistant (XDR), defined as resistant to any fluoroquinolone and at least one second line injectable antibiotic.

The primary objective of this study was to explicitly search for SNPs in known loci associated with antibiotic resistance.

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